PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0809s0107.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 305aa    MW: 32931.5 Da    PI: 9.8169
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0809s0107.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.93.1e-31241298258
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                           D+y+WrKYGqK++kgs+fpr+YY+C+s  gCp++k+ver+++dp ++++tY geHnh
  Kaladp0809s0107.1.p 241 ADEYSWRKYGQKPIKGSPFPRGYYKCSSVrGCPARKHVERAKDDPAMLIVTYGGEHNH 298
                          69*************************988**************************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.2E-10185238IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.2E-32231299IPR003657WRKY domain
PROSITE profilePS5081130.205235301IPR003657WRKY domain
SuperFamilySSF1182907.32E-26238298IPR003657WRKY domain
SMARTSM007744.8E-37240300IPR003657WRKY domain
PfamPF031069.0E-27242298IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MEGGMYVPNT TTLLNLDFAP SSSLSTFTAQ TREELSGQES VLMEAADLLG YARAMELQQQ  60
HVTERTENPE MRMPGMSPPF NFLAASSSAS NRTTGHARFR RSQVPVVEQL SLLPPSSSSP  120
VILDFSKASV EPDCLSLSLG QPLSCSTSTI TTNTNSSSIT AEGSVSNYGI MKPPPPLSAP  180
RVKTCHFHHS SSSSAHMTAA AGKKLSSSTR SCRCTKRIKK CRVKKMVRVP AISSKVADIP  240
ADEYSWRKYG QKPIKGSPFP RGYYKCSSVR GCPARKHVER AKDDPAMLIV TYGGEHNHCS  300
AAPK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-21228298271WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003522668.14e-60PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 17
SwissprotQ9SV151e-54WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLA7LHI74e-60A7LHI7_SOYBN; WRKY50 (Fragment)
TrEMBLI1JUN24e-60I1JUN2_SOYBN; Uncharacterized protein
STRINGGLYMA04G08060.11e-59(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.19e-45WRKY DNA-binding protein 11